The morphological characteristics of small-scale bedforms were measured by means of an acoustic profiling sonar on the Dafeng tidal flat, Jiangsu, in 2009, and in the Jiulong Estuary, Xiamen, in 2010, respectively. The "multi-threshold value" method was utilized to reveal the morphological undulations along which bedforms were present. Analyses of the datasets obtained show that: (1) sand ripples can have irregular shapes, and (2) changes in bedform morphology are small within a single tidal cycle but may be significant over several tidal cycles. Fractal and variogram analyses of the seabed roughness revealed the existence of a significant relationship between current speed and the fractal dimension of the seabed roughness. As current speed increases, seabed roughness increases with a trend of smaller-scale bottom structures being replaced by larger-scale structures. Furthermore, the surface of the larger-scale bottom structures can either become smooth due to the absence of smaller-scale features or become rougher due to the presence of superimposed smaller-scale structures.